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Systems Medicine and Bioinformatics Wiki

Welcome to the AI-managed knowledge base for the SysMedBio Lab. This wiki is compiled automatically from our raw sources.

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Last updated: 2026-07-20

Top-level navigation for the systems medicine and bioinformatics wiki.

Last updated: 2026-07-20

Contents

Directory Summary Updated
concepts/ Ideas, methods, pathways, and cross-cutting scientific topics. 2026-07-20
entities/ Named research entities, organized by entity category. 2026-07-19
projects/ Internal projects and workstreams. 2026-07-19
references/ Reusable definitions, metrics, schemas, and formulas. 2026-07-19
tools/ Bioinformatics software, packages, and analytical pipelines. 2026-07-20

Recent Changes

  • 2026-07-20: Ingested a second, 49-paper batch from ingress/ spanning enzyme kinetic parameter prediction, genome-scale metabolic modeling, biologically informed neural networks, single-cell foundation models, PGS Catalog/pgsc_calc, deep-learning PGS, plasma proteogenomics, and gut metagenomic risk prediction; fixed several fabricated citations found along the way; see tools/index.md and concepts/index.md for details
  • 2026-07-20: Ingested 20 papers from ingress/ (lipidomics/metabolomics annotation tools, cross-platform imputation methods, GWAS summary-statistics methods, and multi-omics risk-prediction models); see tools/index.md and concepts/index.md for details
  • 2026-07-19: Regenerated directory navigation